Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944176.1_cds_XP_016487109.1_77881
CDS Infomation

[gene=LOC107807271] [db_xref=GeneID:107807271] [protein=seipin-2-like] [protein_id=XP_016487109.1] [location=join(9704..10867,11783..12264,12581..12608)] [gbkey=CDS]
Sequence

ATGGAAGATACAAAACCAAACAAGCAAGCCAACAACGGAGACCTATTCGACGATGCGCCA
GAGGAATTTCCCTTCGACGATTGCAACGACAGCTTTTCCGACGCGGAAACTGGCGGATCG
GAGGCTGTCGTAAACCTTAATCGATCACCGAAAAATGAAGATTTTCCGTCGTCGTCTCTC
CGGCGCCGGCGTCCTCTTTCTTACAGTGATTCTGGTAACGATTCGGCTAATTTTAGACCT
TCGGTAAGTTCTGAGAGTTATTTGAATTCTAAAGAGAGAAGGCTTATGTCAATGGAGAAG
GATAAAAATGGAAGTTTGAATTATATAGAAAATTCGAACTCAATGCAGCTTGATTTGAGC
AGAGGAAGACAAAAAAGTAGTGTCGATGAAGAAAATAAGGAGATTTCGACGGTTATGAAT
GCGAATAGTGTAATAATAGGTAATTCAAACGATGATCATTTTATGTTGAAAGAGGATTCT
GTAATTACGGATGTGAACAATGACGGAATAGATAATTCGGAGGTAGTTGATTCGCATTTG
AGAGGAAATGATGATTCAAGTTCGAATATTTTGTTTGATTTAGCCAATTTAGTGATAAAA
GCTGTTGGCTTTCAAGTGAATATGTTGGTTACTTTTGTGAGTTTGATGATAAAGTTGTTT
TCATTTCCTGTATGGGTAATTTATAGCACGTATATGTTTGTGATGGATCCGTTTCAAATA
ATGAGGCGTGGAAAAAGATATGTGATGCACAAGTTTATGAGGAGTTTTGGATTTGTGTTT
GAATGGTTGAAGGAGCAGAGGTCAGTGTGGAAGTTGGGGTTGAAACTCGGATGGGGATGT
TTGTGGTCTGTGTATGTATGTGTTGTTTTGGTTGGATTGCTGGTATCGGCTTTTATAATG
GGTGGCATCTTGATGAGAATTATGGTTGAAGAGCCGATCAGGATGAACGAGCCTTTGAAT
TTTGATTATACAGCAAAAAGCCCAGTTGCATATGTGCCTGTAATAAGGAGTCCAGGTGTG
ACCTGTGGTGTAGGTAGTAAGGATCAAGTGGAGGTTGGGATGGTTGATGGGGTGCGAGTT
ATCCCACCTAATCATCAGTTGCAGGTTACTGTTTCATTAACGTTGCCGGAGTCTGATTAC
AACCGAAATCTGGGCATTTTTCAGGTGAGGGTGGATTTCCTCACTGCTAATGGTAAAGTG
CTAGCTAGCTCCAGGCGACCCTGTATGCTGCAATTTAAAAGCAATCCTATACGCCTTTTC
TCTACTTTCCTTAAGGCTGCCCCTCTTGTCACCGGATATACATCAGAATCCCAAAAGTTG
AGGGTATACTTAAAGGGTTTCTCTGAAGGTTTCGTTCCAACGGCATGCTTGAGGGTGATC
ATTGAGCAACGAGCTGAGTTCCAAACTGGAGGTGGAATTCCTGAAATGTATGCTGCCTCT
TTAACACTGGAATCTGAACTTCCTTTTCTGAAAAGAATGTTATGGTATTGGAAGACAACA
TTATTTGTGTGGGTTAGCATGATGTTGTTTACCATGGAATTTCTTTTCGCTCTTCTTTGC
TGCAAACCTCTTATCATTCCAAGACTAGGACTGAGGCATGATTCAAACAGTCGTGCGGGT
TCACCGAACAACCCACCAGCTGAAAGAGTTCGAGGAAATTTAGCATGCTTATGA

Peptide Sequence

PEP ID

XP_016487109.1
PEP Infomation

PREDICTED: seipin-2-like [Nicotiana tabacum]
Sequence

MEDTKPNKQANNGDLFDDAPEEFPFDDCNDSFSDAETGGSEAVVNLNRSPKNEDFPSSSL
RRRRPLSYSDSGNDSANFRPSVSSESYLNSKERRLMSMEKDKNGSLNYIENSNSMQLDLS
RGRQKSSVDEENKEISTVMNANSVIIGNSNDDHFMLKEDSVITDVNNDGIDNSEVVDSHL
RGNDDSSSNILFDLANLVIKAVGFQVNMLVTFVSLMIKLFSFPVWVIYSTYMFVMDPFQI
MRRGKRYVMHKFMRSFGFVFEWLKEQRSVWKLGLKLGWGCLWSVYVCVVLVGLLVSAFIM
GGILMRIMVEEPIRMNEPLNFDYTAKSPVAYVPVIRSPGVTCGVGSKDQVEVGMVDGVRV
IPPNHQLQVTVSLTLPESDYNRNLGIFQVRVDFLTANGKVLASSRRPCMLQFKSNPIRLF
STFLKAAPLVTGYTSESQKLRVYLKGFSEGFVPTACLRVIIEQRAEFQTGGGIPEMYAAS
LTLESELPFLKRMLWYWKTTLFVWVSMMLFTMEFLFALLCCKPLIIPRLGLRHDSNSRAG
SPNNPPAERVRGNLACL

Transcript Sequence

Gene sequence data has not been registered.